Ali Faisal

Aalto University — Finland

Biochemistry, Genetics and Molecular Biology · Life Sciences

11h-index528citations21works0.02yr avg
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Research Topics

Bioinformatics and Genomic Networks(8), Gene expression and cancer classification(5), Neurobiology of Language and Bilingualism(4), Action Observation and Synchronization(4), MicroRNA in disease regulation(3)

Publications21 total

The neural representation of abstract words may arise through grounding word meaning in language itself
Human Brain Mapping·2021· 34 citedOpen Access
Reconstructing meaning from bits of information
Nature Communications·2019· 116 citedOpen Access
Reconstructing meaning from bits of information
2018· 1 citedOpen Access
Cracking the problem of neural representations of abstract words: grounding word meanings in language itself
2018Open Access
Establishing Video Game Genres Using Data-Driven Modeling and Product Databases
Games and Culture·2015· 31 cited
IEEE International Workshop on Pattern Recognition in NeuroImaging (PRNI), Stanford, CA, 10-12 June 2015
2015
Toward Computational Cumulative Biology by Combining Models of Biological Datasets
PLoS ONE·2014· 18 citedOpen Access
Retrieval of Gene Expression Measurements with Probabilistic Models
Aaltodoc (Aalto University)·2014Open Access
Systematic use of computational methods allows stratification of treatment responders in glioblastoma multiforme
Systems Biomedicine·2013· 1 citedOpen Access
Transfer learning using a nonparametric sparse topic model
Neurocomputing·2013· 12 cited
Comprehensive data-driven analysis of the impact of chemoinformatic structure on the genome-wide biological response profiles of cancer cells to 1159 drugs
BMC Bioinformatics·2012· 22 citedOpen Access
Sparse Nonparametric Topic Model for Transfer Learning
2012· 9 cited
Comprehensive data-driven analysis of the impact of chemoinformatic structure on the genome-wide biological response profiles of cancer cells to 1159 drugs
arXiv (Cornell University)·2011Open Access
Data-driven information retrieval in heterogeneous collections of transcriptomics data links <i>SIM2s</i> to malignant pleural mesothelioma
Bioinformatics·2011· 16 citedOpen Access
Integrative analysis of microRNA, mRNA and aCGH data reveals asbestos‐ and histology‐related changes in lung cancer
Genes Chromosomes and Cancer·2011· 128 citedOpen Access
Asbestos- and histology-related microRNAs in lung cancer
2011
Systematic Use of Computational Methods Allows Stratifying Treatment Responders in Glioblastoma Multiforme
Unknown host publication·2011· 2 cited
Inferring species interaction networks from species abundance data: A comparative evaluation of various statistical and machine learning methods
Ecological Informatics·2010· 63 cited
Inferring species interaction networks from species abundance data: A comparative evaluation of various statistical and machine learning methods Supplementary Material
2010
Probabilistic retrieval and visualization of biologically relevant microarray experiments
BMC Bioinformatics·2009· 26 citedOpen Access
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Frequent Co-authors

Samuel Kaski(9), Riitta Salmelin(5), Leo Lahti(4), Sasa L. Kivisaari(4), Marijn van Vliet(4), Annika Hultén(4), Tiina Lindh‐Knuutila(4), Eeva Kettunen(3), Nils Gehlenborg(3), Alvis Brāzma(3), Jaakko Peltonen(3), Penny Nymark(2), Mohamed Guled(2), Kaisa Salmenkivi(2), Sisko Anttila(2), Sakari Knuutila(2), Frank Dondelinger(2), Dirk Husmeier(2), Colin M. Beale(2), José Caldas(2)