Paul D. Cotter

Teagasc - The Irish Agriculture and Food Development Authority — Ireland

Agricultural and Biological Sciences · Life Sciences

112h-index54.2kcitations729works10.02yr avg
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Research Topics

Probiotics and Fermented Foods(292), Gut microbiota and health(287), Diet and metabolism studies(81), Genomics and Phylogenetic Studies(58), Clostridium difficile and Clostridium perfringens research(55)

Publications729 total

Relationship between the dietary inflammatory index and immune function during pregnancy – A secondary analysis of the MicrobeMom2 Study
European Journal of Clinical Nutrition·2025Open Access
Water kefir multi-omics reveals functional redundancies despite taxonomic differences and the underappreciated contribution of yeast
npj Science of Food·2025Open Access
Effects of kefir on symptoms, sleep, and gut microbiota in children with ADHD: a randomised controlled trial
BMC Psychiatry·2025· 1 citedOpen Access
Genomic characterisation of recurrent Mycobacterium avium isolates from chronically infected patients reveals patterns of within-host evolution
Genome Medicine·2025Open Access
Edible microbiome and dietary microbiota: bridging two interrelated concepts
Current Opinion in Food Science·2025Open Access
Impact of fermented foods consumption on gastrointestinal wellbeing in healthy adults: a systematic review and meta-analysis
Frontiers in Nutrition·2025· 4 citedOpen Access
A technical feasibility study evaluating sustainable enzyme‐based cleaning‐in‐place ( <scp>CIP</scp> ) for removal of milk deposits formed on stainless steel surfaces during cheesemilk pasteurisation
International Journal of Dairy Technology·2025Open Access
Health benefits of ethnic fermented foods
Frontiers in Nutrition·2025· 3 citedOpen Access
Bacteriocins as Natural Antilisterial Food Preservatives
2025
Harnessing agri-food system microbiomes for sustainability and human health
2025
Relationship between the dietary inflammatory index and immune function during pregnancy
European Journal of Obstetrics & Gynecology and Reproductive Biology·2025
Stress and depression risk in early pregnancy associates with suppressed TNF-a levels
European Journal of Obstetrics & Gynecology and Reproductive Biology·2025
Effects of a combined energy restriction and vigorous‐intensity exercise intervention on the human gut microbiome: A randomised controlled trial
The Journal of Physiology·2025· 3 citedOpen Access
Exploring the Functional Potential of the Broiler Gut Microbiome Using Shotgun Metagenomics
Genes·2025· 1 citedOpen Access
Breastfeeding and the milk resistome shape the establishment and transmission of antibiotic resistance genes in the infant gut microbiome
Gut Microbes·2025· 1 citedOpen Access
The food-associated resistome is shaped by processing and production environments
Nature Microbiology·2025· 11 citedOpen Access
Stress and depression risk in pregnancy associates with altered immune function
The World Journal of Biological Psychiatry·2025· 1 cited
Investigating the role of bacterial raw milk community members in chlorate reduction
2025Open Access
Maternal immune activation and antibiotics affect offspring neurodevelopment, behaviour, and microbiome
Brain Behavior & Immunity - Health·2025· 1 citedOpen Access
Faecal microbiota and serum metabolome association with equine metabolic syndrome in connemara ponies
BMC Veterinary Research·2025Open Access
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Frequent Co-authors

R. Paul Ross(22), Colin Hill(15), Órla O’Sullivan(15), Paul W. O’Toole(8), Fergus Shanahan(7), Catherine Stanton(7), Fiona Crispie(7), Fiona Fouhy(6), Tom Beresford(5), John F. Cryan(5), Siobhan F. Clarke(4), Eileen F. Murphy(4), Gerald F. Fitzgerald(4), Timothy G. Dinan(4), Marcus J. Claesson(4), Robert W. Hutkins(3), Eamonn M.M. Quigley(3), Lisa Quigley(3), Caitriona M. Guinane(3), Sylvie Rebuffat(2)