Barbara Uszczyńska-Ratajczak

Pennsylvania Academy of Science — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

19h-index9.8kcitations35works55.62yr avg
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Research Topics

RNA modifications and cancer(16), Cancer-related molecular mechanisms research(11), Genomics and Phylogenetic Studies(10), RNA and protein synthesis mechanisms(10), Mitochondrial Function and Pathology(9)

Publications31 total

CapTrap-seq: Advancing zebrafish transcriptomic research through high-fidelity full-length RNA sequencing
2025Open Access
GENCODE 2025: reference gene annotation for human and mouse
Nucleic Acids Research·2024· 235 citedOpen Access
The GENCODE CLS project: massively expanding the lncRNA catalog through capture long-read RNA sequencing
2024· 22 citedOpen Access
CapTrap-seq: a platform-agnostic and quantitative approach for high-fidelity full-length RNA sequencing
Nature Communications·2024· 21 citedOpen Access
Correction: Profiling subcellular localization of nuclear-encoded mitochondrial gene products in zebrafish
Life Science Alliance·2024Open Access
CapTrap-Seq: A platform-agnostic and quantitative approach for high-fidelity full-length RNA transcript sequencing
2023· 8 citedOpen Access
Digging into the hidden layer of the human and mouse transcriptomes
Lithuanian University of Health Sciences·2022
GENCODE: reference annotation for the human and mouse genomes in 2023
Nucleic Acids Research·2022· 597 citedOpen Access
Profiling subcellular localization of nuclear-encoded mitochondrial gene products in zebrafish
Life Science Alliance·2022· 6 citedOpen Access
Profiling subcellular localization of nuclear-encoded mitochondrial gene products in zebrafish
2021· 1 citedOpen Access
Cytosolic aggregation of mitochondrial proteins disrupts cellular homeostasis by stimulating the aggregation of other proteins
eLife·2021· 116 citedOpen Access
Author response: Cytosolic aggregation of mitochondrial proteins disrupts cellular homeostasis by stimulating the aggregation of other proteins
2021Open Access
Annotation of Full-Length Long Noncoding RNAs with Capture Long-Read Sequencing (CLS)
Methods in molecular biology·2020· 7 cited
Cytosolic aggregation of mitochondrial proteins disrupts cellular homeostasis by stimulating the aggregation of other proteins
Apollo (University of Cambridge)·2020· 7 citedOpen Access
GENCODE 2021
Nucleic Acids Research·2020· 1.4k citedOpen Access
The abundance of the long intergenic non-coding RNA 01087 differentiates between luminal and triple-negative breast cancers and predicts patient outcome
Pharmacological Research·2020· 24 citedOpen Access
The Abundance of Long Intergenic Non-coding RNA 01087 Differentiates Luminal From Triple-negative Breast Cancer Patients and Predicts Their Clinical Outcome
Research Square (Research Square)·2020Open Access
Re-annotation of 191 developmental and epileptic encephalopathy-associated genes unmasks de novo variants in SCN1A
npj Genomic Medicine·2019· 39 citedOpen Access
Systematic re-annotation of 191 genes associated with early-onset epilepsy unmasks <i>de novo</i> variants linked to Dravet syndrome in novel <i>SCN1A</i> exons
2019Open Access
Mitochondrial stress-dependent regulation of cellular protein synthesis
Journal of Cell Science·2019· 60 citedOpen Access
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Frequent Co-authors

Roderic Guigó(19), Sílvia Carbonell Sala(13), Julien Lagarde(12), Adam Frankish(11), Rory Johnson(10), Jonathan M. Mudge(9), Agnieszka Chacińska(9), José M. González(8), Mark Diekhans(7), Marie‐Marthe Suner(7), Paul Flicek(7), Irwin Jungreis(6), Cristina Sisu(6), Toby Hunt(6), Mark Gerstein(6), Michael L. Tress(6), Jane Loveland(5), James C. Wright(5), Andrew Berry(5), Sarah Donaldson(5)