Aaron Streets

Berkeley College — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

29h-index7.4kcitations91works3.62yr avg
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Research Topics

Single-cell and spatial transcriptomics(24), Microfluidic and Capillary Electrophoresis Applications(14), Spectroscopy Techniques in Biomedical and Chemical Research(13), Cell Image Analysis Techniques(11), Epigenetics and DNA Methylation(9)

Publications91 total

Effects of biological fixation methods on stimulated Raman scattering microscopy signal
2025Open Access
Integrated analysis of multimodal long-read epigenetic assays
2025Open Access
Preselection CD4 <sup>+</sup> CD8 <sup>+</sup> thymocytes modulate TCR responsiveness following TCRβ selection
2025Open Access
Single-Nucleus Analysis of Human White Adipose Tissue Reveals Adipocyte Subsets with Distinct Metabolic Profiles
2025Open Access
Scvi-hub: an actionable repository for model-driven single-cell analysis
Nature Methods·2025· 2 citedOpen Access
DiMeLo-cito: a one-tube protocol for mapping protein-DNA interactions reveals CTCF bookmarking in mitosis
2025· 7 citedOpen Access
SRS microscopy identifies inhibition of vitellogenesis as a mediator of lifespan extension by caloric restriction in <i>C. elegans</i>
2025· 1 citedOpen Access
Consensus prediction of cell type labels in single-cell data with popV
Nature Genetics·2024· 29 citedOpen Access
8159 Single Nuclei RNA-Sequencing Reveals Novel Cellular Diversity in Human Neck Adipose Tissue
Journal of the Endocrine Society·2024Open Access
Mapping protein–DNA interactions with DiMeLo-seq
Nature Protocols·2024· 7 citedOpen Access
Imaging intracellular neurotransmitters with vibrational microscopy using isotopologues
2024
Measuring chemical changes during aging in vivo with stimulated Raman scattering microscopy
2024
Measuring chemical changes during aging in vivo with label-free stimulated Raman scattering microscopy
2024
Scvi-hub: an actionable repository for model-driven single cell analysis
2024· 4 citedOpen Access
OR07-02 Single-nucleus RNA-seq Studies In Human White Adipose Tissue Reveal Novel Adipocyte Subtypes And TSHZ3 As A Transcriptional Regulator Of Adipogenesis
Journal of the Endocrine Society·2023Open Access
Deep generative modeling of transcriptional dynamics for RNA velocity analysis in single cells
Nature Methods·2023· 103 citedOpen Access
Consensus prediction of cell type labels with popV
2023· 4 citedOpen Access
Single-cell multiomic analysis of thymocyte development reveals drivers of CD4+ T cell and CD8+ T cell lineage commitment
Nature Immunology·2023· 52 citedOpen Access
Loss of TJP1 disrupts gastrulation patterning and increases differentiation toward the germ cell lineage in human pluripotent stem cells
Developmental Cell·2023· 20 citedOpen Access
Mapping the transcriptional landscape of human white and brown adipogenesis using single-nuclei RNA-seq
Molecular Metabolism·2023· 21 citedOpen Access
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Frequent Co-authors

Nir Yosef(12), Yanyi Huang(10), Nicolas Altemose(9), Adam Gayoso(7), Zoë Steier(7), Annie Maslan(7), Gabriel Dorlhiac(7), Romain Lopez(5), Jeffrey Regier(5), Aaron F. Straight(5), Mohammad Lotfollahi(4), Fabian J. Theis(4), Kousik Sundararajan(4), Anushka Gupta(4), Markita P. Landry(4), Stephen R. Quake(4), Tao Chen(4), Ellen A. Robey(4), Jonathan A. White(4), Sergey Nurk(3)