M Beer

Johns Hopkins University — United States

Physics and Astronomy · Physical Sciences

55h-index18.4kcitations5.0kworks6.72yr avg
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Research Topics

Magnetic confinement fusion research(61), Genomics and Chromatin Dynamics(48), RNA and protein synthesis mechanisms(46), DNA and Nucleic Acid Chemistry(34), Ionosphere and magnetosphere dynamics(30)

Publications5.0k total

Corrigendum: Machine learning identifies activation of RUNX/AP-1 as drivers of mesenchymal and fibrotic regulatory programs in gastric cancer.
PubMed·2026
An expanded registry of candidate cis-regulatory elements
Nature·2026· 3 citedOpen Access
The Histone Methyltransferase KMT2D is a Critical Mediator of Lineage Plasticity and Therapeutic Response in Castration Resistant Prostate Cancer
Cancer Research·2025Open Access
Abstract 4370250: Regulatory Profiling of LMNA Identifies Therapeutic Targets for LMNA-Associated Dilated Cardiomyopathy
Circulation·2025
Comparison on Sensor Fault Detection Techniques for SHM Systems
2025Open Access
Investigation of Robustness in Detecting and Localizing Sensor Malfunctions in Deteriorating Structural Health Monitoring Systems
2025Open Access
Investigating Robustness in Detection, Localization and Compensation of Sensor Malfunctions in Degrading Structural Health Monitoring Systems
2025Open Access
Perturb-seq reveals distinct responses to pluripotency regulator dosages underlying the control of self-renewal and differentiation
2025Open Access
Regulation of translation elongation and integrated stress response in heat-shocked neurons
Cell Reports·2025· 1 citedOpen Access
Abstract 1958: Chromatin accessibility landscapes of colorectal cancer development and genome-wide cell-free DNA fragmentation
Cancer Research·2025
FLT1 and other candidate fetal haemoglobin modifying loci in sickle cell disease in African ancestries
Nature Communications·2025· 4 citedOpen Access
Non-local modeling of enhancer-promoter interactions, a correspondence on “LOCO-EPI: Leave-one-chromosome-out (LOCO) as a benchmarking paradigm for deep learning based prediction of enhancer-promoter interactions”
Applied Intelligence·2025
Theory and application of possibility and evidence in reliability analysis and design optimization
Journal of Reliability Science and Engineering·2025· 15 citedOpen Access
How Shapley Value and Its Generalizations Can Help in the Analysis of Complex Engineering Systems and What Next
Lecture notes in computer science·2025· 3 cited
What Is Optimal Granularity When Estimating Reliability of a Complex Engineering Systems
Lecture notes in computer science·2025
Bayesian Updating for Reliability with Imprecise Probabilities: Julia Implementation and Application to the NASA Langley UQ Challenge 2019
2025Open Access
UncertaintyQuantification.jl: Efficient Reliability Analysis Powered by Julia
2025Open Access
An Expanded Registry of Candidate cis-Regulatory Elements for Studying Transcriptional Regulation
2024· 9 citedOpen Access
ATAC-seq protocol v1
2024Open Access
Flow-cytometry CRISPRi screen v1
2024Open Access
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Frequent Co-authors

G. W. Hammett(14), Dongwon Lee(7), W. Dorland(6), E. Mazzucato(6), R. E. Bell(6), R. Budny(6), C. E. Bush(6), G. Rewoldt(6), S. H. Batha(5), F. M. Levinton(5), G. Schmidt(5), E. J. Synakowski(5), M. C. Zarnstorff(5), B. LeBlanc(5), Carrie Davis(4), Alexander Dobin(4), Joseph R. Ecker(4), Andrew S. McCallion(4), T. S. Hahm(4), W. M. Tang(4)