Arun Ramani

Hospital for Sick Children — Canada

Biochemistry, Genetics and Molecular Biology · Life Sciences

27h-index4.4kcitations93works1.12yr avg
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Research Topics

Cancer Genomics and Diagnostics(16), Genomics and Rare Diseases(15), RNA modifications and cancer(12), RNA Research and Splicing(10), Bioinformatics and Genomic Networks(9)

Publications92 total

Dataset creation and benchmarking for Kashmiri news snippet classification using fine-tuned transformer and LLM models in a low resource setting
Scientific Reports·2025Open Access
Assessing the diagnostic impact of blood transcriptome profiling in a pediatric cohort previously assessed by genome sequencing
npj Genomic Medicine·2025· 2 citedOpen Access
Leveraging Transfer Learning and Legal Named Entity Masking for Classification of Rhetorical Roles in Indian Legal Judgments
2025
DDConvNet: A deep learning approach for driver drowsiness detection
AIP conference proceedings·2025· 1 cited
Assessing the diagnostic impact of blood transcriptome profiling in a pediatric cohort previously assessed by genome sequencing
2024Open Access
Investigating instructors’ and students’ perceived knowledge and attitudes in using generative AI tools for teaching and learning
ASCILITE Publications·2024Open Access
Pushing the boundaries of rare disease diagnostics with the help of the first Undiagnosed Hackathon
Nature Genetics·2024· 7 citedOpen Access
PneumonXNet - A deep learning model for pneumonia detection
2024
DIPG-86. INVESTIGATING THE TUMOR ENVIRONMENT AND SIGNALING DEPENDENCIES DRIVING DIFFUSE MIDLINE GLIOMA TUMOR INITIATION, PROGRESSION, AND RESISTANCE: A COMPREHENSIVE APPROACH LEVERAGING BULK MULTIOMICS DECONVOLUTION AND SINGLE-CELL OMICS VALIDATION
Neuro-Oncology·2024Open Access
Clinical Implementation of MetaFusion for Accurate Cancer-Driving Fusion Detection from RNA Sequencing
Journal of Molecular Diagnostics·2023· 6 citedOpen Access
Conserved transcriptional programming across sex and species after peripheral nerve injury predicts treatments for neuropathic pain
British Journal of Pharmacology·2023· 20 citedOpen Access
Whole genome analysis for 163 gRNAs in Cas9-edited mice reveals minimal off-target activity
Communications Biology·2023· 22 citedOpen Access
Trio RNA sequencing in a cohort of medically complex children
The American Journal of Human Genetics·2023· 28 citedOpen Access
RNAget: an API to securely retrieve RNA quantifications
Bioinformatics·2023· 4 citedOpen Access
The clinical utility of integrative genomics in childhood cancer extends beyond targetable mutations
Nature Cancer·2022· 121 citedOpen Access
Evaluation of single-cell RNAseq labelling algorithms using cancer datasets
Briefings in Bioinformatics·2022· 16 citedOpen Access
Bridging clinical care and research in Ontario, Canada: Maximizing diagnoses from reanalysis of clinical exome sequencing data
Clinical Genetics·2022· 9 cited
EPCO-17. UNMASKING CLONAL EVOLUTION OF DIFFUSE INTRINSIC GLIOMA USING MULTI-MODAL GENOMIC DATA
Neuro-Oncology·2022Open Access
Conserved transcriptional programming across sex and species after peripheral nerve injury predicts treatments for neuropathic pain
2022· 2 citedOpen Access
Genomics4RD: An integrated platform to share Canadian deep-phenotype and multiomic data for international rare disease gene discovery.
PubMed·2022· 17 citedOpen Access
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Frequent Co-authors

Michael Brudno(22), Edward M. Marcotte(10), Cynthia Hawkins(8), Andrew Fraser(7), Răzvan Bunescu(6), Raymond J. Mooney(6), Andrei L. Turinsky(6), Mia Husić(6), James J. Dowling(5), Scott Ryall(4), Robert Siddaway(4), Pouria Mashouri(4), Julia Upton(4), Christian R. Marshall(4), Ping Luo(4), Alaina Mahalanabis(4), Alaine Naidas(4), Erik Christensen(4), Parisa Shooshtari(4), Trevor J. Pugh(4)