Macha Nikolski

Centre National de la Recherche Scientifique — France

Biochemistry, Genetics and Molecular Biology · Life Sciences

27h-index4.7kcitations150works2.32yr avg
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Research Topics

Genomics and Phylogenetic Studies(15), Bioinformatics and Genomic Networks(12), Cancer, Hypoxia, and Metabolism(11), Metabolomics and Mass Spectrometry Studies(10), Yeasts and Rust Fungi Studies(10)

Publications150 total

Deciphering the emergence of mutations in Pseudomonas aeruginosa after ceftolozane/tazobactam treatment and evaluating therapeutic alternatives
BMC Microbiology·2025Open Access
395 Spatial transcriptomic profiling outlines the evolution of molecular trajectories across different stages of cutaneous squamous cell carcinoma
Journal of Investigative Dermatology·2025
TMIC-91. Deciphering spatio-temporal trajectories of tissue adaptation after surgical resection of glioblastoma
Neuro-Oncology·2025Open Access
P12.14.A METABOLIC ADAPTATIONS OF GLIOBLASTOMA CELLS DURING TUMOR RELAPSE
Neuro-Oncology·2025Open Access
P01.04.B TRANSCRIPTOMICS OF PERIPHERAL AND CORE AREAS OF GLIOBLASTOMA REVEALS CNTN2 AS A POTENTIAL THERAPEUTIC TARGET
Neuro-Oncology·2025Open Access
Metabolism-based scoring of cutaneous squamous cell carcinoma to predict tumour features and responses to treatment with dihydroorotate dehydrogenase inhibitors
British Journal of Dermatology·2025· 1 citedOpen Access
SeuratIntegrate: an R package to facilitate the use of integration methods with Seurat
Bioinformatics·2025· 3 citedOpen Access
TrialMatchAI: An End-to-End AI-powered Clinical Trial Recommendation System to Streamline Patient-to-Trial Matching
arXiv (Cornell University)·2025Open Access
Exploiting metabolic vulnerability in glioblastoma using a brain-penetrant drug with a safe profile
EMBO Molecular Medicine·2025· 3 citedOpen Access
Paired transcriptomics of glioblastoma peripheral and core areas reveals CNTN2 as a potential therapeutic target
SSRN Electronic Journal·2025Open Access
Mobilization of an ICEclc-Like Element as a Potential Mechanism for the Spread of IMP-13 Carbapenemase in Pseudomonas aeruginosa
Journal of Global Antimicrobial Resistance·2024· 2 citedOpen Access
SeuratIntegrate: an R package to facilitate the use of integration methods with Seurat
2024Open Access
Using DIMet for Differential Analysis of Labeled Metabolomics Data: A Step-by-step Guide Showcasing the Glioblastoma Metabolism
BIO-PROTOCOL·2024Open Access
P06.12.B Microbiota-gut-brain axis in glioblastoma development and therapeutic resistance
Neuro-Oncology·2024Open Access
Holistic understanding of trimethoprim resistance in <i>Streptococcus pneumoniae</i> using an integrative approach of genome-wide association study, resistance reconstruction, and machine learning
mBio·2024· 3 citedOpen Access
DIMet: an open-source tool for differential analysis of targeted isotope-labeled metabolomics data
Bioinformatics·2024· 2 citedOpen Access
Single cell tracing of Pomc neurons reveals recruitment of ‘Ghost’ subtypes with atypical identity in a mouse model of obesity
Nature Communications·2024· 9 citedOpen Access
Datasets of the DIMet manuscript
Zenodo (CERN European Organization for Nuclear Research)·2024Open Access
Author Reply to Peer Reviews of Exploiting metabolic vulnerability in glioblastoma using a brain-penetrant drug with a safe profile
2024
Roadmap for a European cancer data management and precision medicine infrastructure
Nature Cancer·2024· 8 citedOpen Access
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Frequent Co-authors

Aurélien Barré(12), David James Sherman(8), Alexis Groppi(7), Benjamin Dartigues(7), Hayssam Soueidan(7), Daniel Jacob(5), Pascal Durrens(4), Thierry Schaeverbeke(4), Justine Rudewicz(4), Emmanuel Bouilhol(4), Patrick Wincker(3), Jean‐Luc Souciet(3), Géraldine Jean(3), Reza M. Salek(3), Steffen Neumann(3), Daniel Schober(3), Elon Correa(3), Catherine Deborde(3), Dominique Rolin(3), Kenneth Haug(3)