Mark M. Tanaka

Department of Biotechnology — India

Biochemistry, Genetics and Molecular Biology · Life Sciences

32h-index4.7kcitations124works1.12yr avg
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Research Topics

Evolution and Genetic Dynamics(36), Tuberculosis Research and Epidemiology(29), Mycobacterium research and diagnosis(22), Genomics and Phylogenetic Studies(21), Bacteriophages and microbial interactions(18)

Publications124 total

What drives bacterial extinction? The role of bacteriophages
Theoretical Population Biology·2025Open Access
Stably encoding phylogenetic trees with folios of leaf addresses
Journal of Theoretical Biology·2025Open Access
An equal-tempered measure of linkage disequilibrium
Theoretical Population Biology·2025Open Access
Drift and dispersal hinder the evolution of facultative asexual reproduction
Evolution·2025· 1 citedOpen Access
Stably Encoding Phylogenetic Trees with Folios of Leaf Addresses
SSRN Electronic Journal·2025Open Access
How cultural innovations trigger the emergence of new pathogens
Proceedings of the National Academy of Sciences·2024· 6 citedOpen Access
Extinctions Caused by Host-Range Expansion
SIAM Journal on Applied Dynamical Systems·2024· 1 cited
Clinical Setting Comparative Analysis of Uropathogens and Antibiotic Resistance: A Retrospective Study Spanning the Coronavirus Disease 2019 Pandemic
Open Forum Infectious Diseases·2023· 4 citedOpen Access
Estimating the Relative Contribution of Transmission to the Prevalence of Drug Resistance in Tuberculosis
2023
Genomic Epidemiology and Multilevel Genome Typing of Australian Salmonella enterica Serovar Enteritidis
Microbiology Spectrum·2023· 9 citedOpen Access
Spatial dynamics of inflammation-causing and commensal bacteria in the gastrointestinal tract
Journal of Theoretical Biology·2022· 2 cited
MGTdb: A web service and database for studying the global and local genomic epidemiology of bacterial pathogens
2022· 1 citedOpen Access
Surviving environmental change: when increasing population size can increase extinction risk
Proceedings of the Royal Society B Biological Sciences·2022· 13 citedOpen Access
Genomic epidemiology and multilevel genome typing of Australian <i>Salmonella enterica</i> serovar Enteritidis
2022
Genomic dissection of the microevolution of Australian epidemic <i>Bordetella pertussis</i>
Emerging Microbes & Infections·2022· 15 citedOpen Access
Genomic dissection of the microevolution of Australian epidemic <i>Bordetella pertussis</i>
2022· 1 citedOpen Access
Genomic dissection of the microevolution of Australian epidemic <i>Bordetella pertussis</i>
Figshare·2022Open Access
Gut mutualists can persist in host populations despite low fidelity of vertical transmission
Evolutionary Human Sciences·2022· 3 citedOpen Access
MGTdb: a web service and database for studying the global and local genomic epidemiology of bacterial pathogens
Database·2022· 14 citedOpen Access
The role of a programmatic immune response on the evolution of pathogen traits
Journal of Theoretical Biology·2021
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Frequent Co-authors

Andrew Francis(9), Ruiting Lan(9), Sophie Octavia(8), Peter A. White(6), Vitali Sintchenko(6), Qinning Wang(4), Josephine F. Reyes(4), Scott A. Sisson(3), Rowena A. Bull(3), William D. Rawlinson(3), John‐Sebastian Eden(3), Fabio Luciani(3), Sandeep Kaur(3), Maciej F. Boni(2), Edward C. Holmes(2), Roland R. Regoes(2), Rebecca H. Chisholm(2), Stephen M. Riordan(2), Michael Grimm(2), Li Zhang(2)