Casey Bergman

University of Georgia — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

43h-index13.0kcitations198works2.02yr avg
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Research Topics

Genomics and Phylogenetic Studies(55), Chromosomal and Genetic Variations(53), Cold Atom Physics and Bose-Einstein Condensates(19), RNA and protein synthesis mechanisms(19), Quantum, superfluid, helium dynamics(19)

Publications198 total

Horizontal Transfer and Recombination Fuel Ty4 Retrotransposon Evolution in <i>Saccharomyces</i>
Genome Biology and Evolution·2025· 1 citedOpen Access
Evolution of a Restriction Factor by Domestication of a Yeast Retrotransposon
Molecular Biology and Evolution·2024· 3 citedOpen Access
Horizontal transfer and recombination fuel Ty4 retrotransposon evolution in <i>Saccharomyces</i>
2023Open Access
Reproducible evaluation of transposable element detectors with McClintock 2 guides accurate inference of Ty insertion patterns in yeast
Mobile DNA·2023· 16 citedOpen Access
Reproducible evaluation of transposable element detectors with McClintock 2 guides accurate inference of Ty insertion patterns in yeast
2023· 4 citedOpen Access
Local assembly of long reads enables phylogenomics of transposable elements in a polyploid cell line
Nucleic Acids Research·2022· 22 citedOpen Access
Ongoing transposition in cell culture reveals the phylogeny of diverse <i>Drosophila</i> S2 sublines
Genetics·2022· 5 citedOpen Access
Genome Assembly of the Ty1-Less Saccharomyces paradoxus Strain DG1768
Microbiology Resource Announcements·2022· 8 citedOpen Access
Long-Read Genome Assembly of Saccharomyces uvarum Strain CBS 7001
Microbiology Resource Announcements·2022· 12 citedOpen Access
Local assembly of long reads enables phylogenomics of transposable elements in a polyploid cell line
2022· 3 citedOpen Access
Ongoing transposition in cell culture reveals the phylogeny of diverse <i>Drosophila</i> S2 sub-lines
2021· 1 citedOpen Access
A novel transposable element-based authentication protocol for <i>Drosophila</i> cell lines
G3 Genes Genomes Genetics·2021· 9 citedOpen Access
Complete mitochondrial genome of the longhorn date palm stem borer<i>Jebusaea hammerschmidtii</i>(Reiche, 1878)
Mitochondrial DNA Part B·2021· 3 citedOpen Access
A novel transposable element based authentication protocol for <i>Drosophila</i> cell lines
2021Open Access
Transposable element profiles reveal cell line identity and loss of heterozygosity in <i>Drosophila</i> cell culture
Genetics·2021· 26 citedOpen Access
Haplotype-resolved genome assembly enables gene discovery in the red palm weevil Rhynchophorus ferrugineus
Scientific Reports·2021· 33 citedOpen Access
Transposable element profiles reveal cell line identity and loss of heterozygosity in <i>Drosophila</i> cell culture
2021Open Access
Haplotype-resolved genome assembly enables gene discovery in the red palm weevil <i>Rhynchophorus ferrugineus</i>
2020Open Access
A Meta-Analysis of <i>Wolbachia</i> Transcriptomics Reveals a Stage-Specific <i>Wolbachia</i> Transcriptional Response Shared Across Different Hosts
G3 Genes Genomes Genetics·2020· 13 citedOpen Access
Evolution of Ty1 copy number control in yeast by horizontal transfer and recombination
PLoS Genetics·2020· 46 citedOpen Access
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Frequent Co-authors

S Celniker(6), Raquel Linheiro(5), Douda Bensasson(5), Michael Ashburner(5), Martin Gerner(4), Goran Nenadić(4), Maximilian Haeussler(4), Martin Kreitman(3), Hadi Quesneville(3), Obi L. Griffith(3), Stephen B. Montgomery(3), Steven M. Gallo(3), Marc S. Halfon(3), Steven J.M. Jones(3), Andrew G. Clark(2), Michael B. Eisen(2), Timothy B. Sackton(2), Enrique Blanco(2), Sam Griffiths‐Jones(2), Roger A. Hoskins(2)