Assaf Avihoo

Microsoft (Israel) — Israel

Biochemistry, Genetics and Molecular Biology · Life Sciences

6h-index136citations9works0.02yr avg
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Research Topics

RNA and protein synthesis mechanisms(9), RNA modifications and cancer(7), RNA Research and Splicing(5), Bacterial Genetics and Biotechnology(2), Genomics and Phylogenetic Studies(1)

Publications9 total

RNAthermsw: Direct Temperature Simulations for Predicting the Location of RNA Thermometers
PLoS ONE·2014· 16 citedOpen Access
RNAfbinv: an interactive Java application for fragment-based design of RNA sequences
Bioinformatics·2013· 20 citedOpen Access
RNAexinv: An extended inverse RNA folding from shape and physical attributes to sequences
BMC Bioinformatics·2011· 39 citedOpen Access
An image processing approach to computing distances between RNA secondary structures dot plots
Algorithms for Molecular Biology·2009· 22 citedOpen Access
Reconstruction of Natural RNA Sequences from RNA Shape, Thermodynamic Stability, Mutational Robustness, and Linguistic Complexity by Evolutionary Computation
Journal of Biomolecular Structure and Dynamics·2008· 18 cited
In Silico Design of Small RNA Switches
IEEE Transactions on NanoBioscience·2007· 13 cited
Temperature and Mutation Switches in the Secondary Structure of Small RNAs
2006· 3 cited
Shape Similarity Measures for the Design of Small RNA Switches
Journal of Biomolecular Structure and Dynamics·2006· 5 cited
Fine-grain matrix graph representation for predicting mutations leading to conformational rearrangements in small RNAs
Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004.·2004

Frequent Co-authors

Danny Barash(9), Alexander Churkin(2), Nir Dromi(2), Michal Shapira(2), Tor Ivry(1), Shahar Michal(1), Guillermo Sapiro(1), Lina Weinbrand(1), Idan Gabdank(1)