Julie Marin

Inserm — France

Earth and Planetary Sciences · Physical Sciences

22h-index2.5kcitations58works3.82yr avg
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Research Topics

Evolution and Paleontology Studies(15), Genetic diversity and population structure(12), Genomics and Phylogenetic Studies(10), Antibiotic Resistance in Bacteria(10), Amphibian and Reptile Biology(10)

Publications58 total

Evidence for Neolithic acquisition of the high pathogenic island by <i>Escherichia coli</i> followed by recent selection
2025Open Access
Comprehensive toolkit integrating lifestyle and clinical questionnaires with gut microbiota profiling via rectal swabs: application in intensive care cirrhotic patients
Journal of Medical Microbiology·2025Open Access
Validation of rectal swabbing for total and aerobic gut microbiota study
Microbiology Spectrum·2025· 2 citedOpen Access
Genomic evidence of <i>Escherichia coli</i> gut population diversity translocation in leukemia patients
mSphere·2024Open Access
Validation of rectal swabbing for total and aerobic gut microbiota study
2024· 1 citedOpen Access
Optimization of Mycobacterium tuberculosis DNA processing prior to whole genome sequencing
Tuberculosis·2024· 2 citedOpen Access
Genomic evidence of <i>Escherichia coli</i> gut population diversity translocation in leukemia patients
2024Open Access
Implementation of the WHO Tricycle protocol for surveillance of extended-spectrum β-lactamase producing Escherichia coli in humans, chickens, and the environment in Madagascar: a prospective genomic epidemiology study
The Lancet Microbe·2024· 29 citedOpen Access
<i>Escherichia coli</i> extra-intestinal population translocation in leukemia patients
2024Open Access
Towards the reconstruction of a global TB history using a new pipeline “TB-Annotator"
Tuberculosis·2023· 6 citedOpen Access
The bacterial genetic determinants of Escherichia coli capacity to cause bloodstream infections in humans
PLoS Genetics·2023· 25 citedOpen Access
Epistatic interactions between the high pathogenicity island and other iron uptake systems shape Escherichia coli extra-intestinal virulence
Nature Communications·2023· 33 citedOpen Access
Cross sectional survey of Varicella-Zoster virus and measles seropositivity in people living with HIV in a Parisian suburb and a review of current immunization guidelines
Vaccine·2023· 3 cited
Performances of bioinformatics tools for the analysis of sequencing data of Mycobacterium tuberculosis complex strains
Tuberculosis·2023· 3 cited
Tricycle surveillance in Antananarivo, Madagascar: circulation of both extended-spectrum beta-lactamase producing <i>Escherichia coli</i> strains and plasmids among humans, chickens and the environment
2023· 5 citedOpen Access
The bacterial genetic determinants of <i>Escherichia coli</i> capacity to cause bloodstream infections in humans
2023· 3 citedOpen Access
Using gamification to improve engagement and learning outcomes in medical microbiology: the case study of ‘BacteriaGame’
FEMS Microbiology Letters·2023· 20 cited
Safety and Fast Whole-Genome Sequencing of Mycobacterium Tuberculosis Complex DNA
SSRN Electronic Journal·2023Open Access
Use of Whole-Genome Sequencing to Explore Mycobacterium tuberculosis Complex Circulating in a Hotspot Department in France
Microorganisms·2022· 3 citedOpen Access
The Population Genomics of Increased Virulence and Antibiotic Resistance in Human Commensal Escherichia coli over 30 Years in France
Applied and Environmental Microbiology·2022· 44 citedOpen Access
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Frequent Co-authors

S. Blair Hedges(15), Nicolás Vidal(8), Érick Denamur(8), Étienne Carbonnelle(8), Olivier Clermont(7), Samira Dziri(7), Stephen C. Donnellan(6), François Blanquart(6), Typhaine Billard‐Pomares(6), Bruce E. Young(5), Giovanni Rapacciuolo(5), Thomas M. Brooks(5), Guilhem Royer(5), Amaury Lambert(5), Pauline Quagliaro(5), Catherine H. Graham(4), Jocelyn E. Behm(4), Gabriel C. Costa(4), Matthew R. Helmus(4), Volker C. Radeloff(4)