Elyse Stachler

Broad Institute — United States

Environmental Science · Physical Sciences

19h-index2.2kcitations35works2.32yr avg
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Research Topics

Bacteriophages and microbial interactions(8), SARS-CoV-2 detection and testing(8), SARS-CoV-2 and COVID-19 Research(6), Fecal contamination and water quality(5), Gut microbiota and health(4)

Publications34 total

P-193. Multiplex testing optimization for Field Work Pandemic Prevention in West Africa
Open Forum Infectious Diseases·2026Open Access
Multiplexed detection of febrile infections using CARMEN
Nature Communications·2025· 1 citedOpen Access
Development of a Combined Clinical and Research-Developed Testing Strategy for Highly Pathogenic Avian Influenza A Virus H5
Open Forum Infectious Diseases·2025Open Access
Adaptation of the multiplexed CRISPR-Cas13 CARMEN RVP assay for longitudinal detection of respiratory pathogens from air samples
2025Open Access
Rapid development and field evaluation of a portable CRISPR-based assay for Mpox during the 2025 Sierra Leone outbreak
2025Open Access
Real-time, multi-pathogen wastewater genomic surveillance with Freyja 2
2025· 1 citedOpen Access
Enhancing the response to avian influenza in the US and globally
The Lancet Regional Health - Americas·2025· 9 citedOpen Access
Establishing Methods to Monitor Influenza (A)H5N1 Virus in Dairy Cattle Milk, Massachusetts, USA
Emerging infectious diseases·2025· 7 citedOpen Access
Combing the haystacks: The search for highly pathogenic avian influenza virus using a combined clinical and research-developed testing strategy
2025· 2 citedOpen Access
Establishing methods to monitor H5N1 influenza virus in dairy cattle milk
2024· 3 citedOpen Access
Early detection and surveillance of SARS-CoV-2 genomic variants in wastewater using COJAC
Nature Microbiology·2022· 173 citedOpen Access
Potential probiotic approaches to control <i>Legionella</i> in engineered aquatic ecosystems
FEMS Microbiology Ecology·2022· 18 citedOpen Access
Wastewater-Based Estimation of the Effective Reproductive Number of SARS-CoV-2
Environmental Health Perspectives·2022· 184 citedOpen Access
Inferring transmission fitness advantage of SARS-CoV-2 variants of concern from wastewater samples using digital PCR, Switzerland, December 2020 through March 2021
Repository for Publications and Research Data (ETH Zurich)·2022· 23 citedOpen Access
Inferring Transmission Fitness Advantage of SARS-CoV-2 Variants of Concern in Wastewater Using Digital PCR
2021· 4 citedOpen Access
Bacteriophage Treatment before Chemical Disinfection Can Enhance Removal of Plastic-Surface-Associated Pseudomonas aeruginosa
Applied and Environmental Microbiology·2021· 43 citedOpen Access
Wastewater-based estimation of the effective reproductive number of SARS-CoV-2
2021· 56 citedOpen Access
Detection and surveillance of SARS-CoV-2 genomic variants in wastewater
2021· 92 citedOpen Access
Co-Occurrence of crAssphage with Antibiotic Resistance Genes in an Impacted Urban Watershed
Environmental Science & Technology Letters·2019· 64 cited
Metagenomics and the development of viral water quality tools
npj Clean Water·2019· 100 citedOpen Access
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Frequent Co-authors

Kyle Bibby(14), Anina Kull(7), Timothy R. Julian(7), Lea Caduff(6), Xavier Fernández-Cassi(6), Pravin Ganesanandamoorthy(6), Tamar Kohn(6), Christoph Ort(6), Pardis C. Sabeti(6), Tanja Stadler(4), David Dreifuss(4), Alexander J. Devaux(4), Niko Beerenwinkel(4), Kyle McMahon(4), Liam Stenson(4), Al Ozonoff(4), Benay Akyon(3), Leonard W. Casson(3), Charles N. Haas(3), Michael R. Gomez(3)