Jan Budczies

German Cancer Research Center — Germany

Biochemistry, Genetics and Molecular Biology · Life Sciences

64h-index24.1kcitations415works3.62yr avg
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Research Topics

Cancer Genomics and Diagnostics(138), Cancer Immunotherapy and Biomarkers(68), Metabolomics and Mass Spectrometry Studies(66), Lung Cancer Treatments and Mutations(61), Cancer, Lipids, and Metabolism(59)

Publications414 total

Diagnostic whole transcriptome sequencing in a series of 1233 FFPE solid tumor samples
British Journal of Cancer·2026Open Access
Regulation of laboratory-developed tests and in-house in vitro diagnostic medical devices in the United States and the European Union—a comparative overview
ESMO Open·2025· 2 citedOpen Access
Supplementary Data: Figures S1-S6 and Tables S1-S6 from Inferred Immune-Cell Activity Is an Independent Predictor of HER2-Negative Breast Cancer Prognosis and Response to Paclitaxel-Based Therapy in the GeparSepto Trial
2025Open Access
Advancing Lung Cancer Staging: Integrating IASLC Recommendations and Bioinformatics to Delineate Tumor Origins
Journal of Thoracic Oncology·2025· 2 citedOpen Access
Exploiting TGF-β-mediated Stromal Programming in Homologous Recombination-Deficient Pancreatic Cancer
2025Open Access
Whole Exome Sequencing on FHIR: Towards Adoption in Clinical Practice for Precision Oncology Pipelines
Studies in health technology and informatics·2025Open Access
155eP Microcosting analysis of combined whole genome sequencing and whole transcriptome sequencing in cancer diagnostics
ESMO Open·2025Open Access
1980P Tumor mutational burden (TMB) and proliferation as negative prognostic factors for ALK+ lung cancer: First results from the randomized ABP phase II trial
Annals of Oncology·2025
2251P Immune features of the tumor microenvironment are mirrored in PBMCs and predict second-line outcome in advanced pancreatic cancer: Insights from the PREDICT trial
Annals of Oncology·2025
Differentiating Main-Duct IPMN from Chronic Pancreatitis Using Next-Generation Sequencing of Main Pancreatic Duct Fluid: A Pilot Study
Diagnostics·2025Open Access
Impact of Baseline β-Catenin Comutations on Prognosis in EGFR-Mutant Lung Cancer
JCO Precision Oncology·2025· 1 citedOpen Access
CG>TG mutation frequency as negative predictor of homologous recombination deficiency in ovarian and breast cancer
Communications Biology·2025Open Access
An immune responsive tumor microenvironment imprints into PBMCs and predicts outcome in advanced pancreatic cancer: lessons from the PREDICT trial
Molecular Cancer·2025· 1 citedOpen Access
Contribution of genetics to hematopoietic stem cell mobilization: a genomewide association study of 564 healthy donors mobilized with granulocyte colony-stimulating factor
Haematologica·2025· 1 citedOpen Access
Corrigendum to “A reproducibility study on invasion in small pulmonary adenocarcinoma according to the WHO and a modified classification, supported by biomarkers” [Lung Cancer 199 (2025) 108060]
Lung Cancer·2025Open Access
A PBMC and machine learning based biomarker signature to predict second line chemotherapy success in advanced PDAC: Translational data of the PREDICT trial—A prospective, multicenter, trial of the AIO Pancreatic Cancer Group (AIO-PAK-0216).
Journal of Clinical Oncology·2025
Abstract 2057: CG>TG mutation frequency as negative predictor of homologous recombination deficiency in ovarian and breast cancer
Cancer Research·2025
Comprehensive genomic profiling requires a blended ecosystem of learning healthcare and clinical trials
British Journal of Cancer·2025· 1 citedOpen Access
EGFR-mediated local invasiveness and response to Cetuximab in head and neck cancer
Molecular Cancer·2025· 11 citedOpen Access
Multi-omics analysis to uncover the molecular basis of tumor budding in head and neck squamous cell carcinoma
npj Precision Oncology·2025· 4 citedOpen Access
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Frequent Co-authors

Carsten Denkert(28), Manfred Dietel(19), Albrecht Stenzinger(19), Wilko Weichert(18), Peter Schirmacher(12), Frederick Klauschen(11), Silvia Darb‐Esfahani(10), Sibylle Loibl(10), Berit Müller(10), Michael Thomas(10), Volker Endris(10), Stefan Fröhling(10), Balázs Győrffy(9), Eugen Rempel(9), Michael Allgäuer(8), Petros Christopoulos(8), Martina Kirchner(8), Oliver Fiehn(7), Anna‐Lena Volckmar(7), Jonas Leichsenring(7)