Dmitri Beglov

Boston University — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

35h-index9.9kcitations67works3.42yr avg
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Research Topics

Protein Structure and Dynamics(35), Computational Drug Discovery Methods(22), Enzyme Structure and Function(15), RNA and protein synthesis mechanisms(9), Glycosylation and Glycoproteins Research(7)

Publications67 total

Modeling Protein–Protein and Protein–Ligand Interactions by the ClusPro Team in CASP16
UNC Libraries·2025Open Access
Modeling Protein–Protein and Protein–Ligand Interactions by the <scp>ClusPro</scp> Team in <scp>CASP16</scp>
Proteins Structure Function and Bioinformatics·2025· 3 citedOpen Access
E-FTMap: A Protein Structure Based Pharmacophore Identification Server for Guiding Fragment Expansion
Journal of Molecular Biology·2025· 3 citedOpen Access
Expanding FTMap for Fragment-Based Identification of Pharmacophore Regions in Ligand Binding Sites
Journal of Chemical Information and Modeling·2024· 11 citedOpen Access
Uncertainty quantification of receptor ligand binding sites prediction
PubMed·2024Open Access
Impact of <scp>AlphaFold</scp> on structure prediction of protein complexes: The <scp>CASP15‐CAPRI</scp> experiment
Proteins Structure Function and Bioinformatics·2023· 79 citedOpen Access
Impact of AlphaFold on Structure Prediction of Protein Complexes: The CASP15-CAPRI Experiment
2023· 17 citedOpen Access
The ClusPro AbEMap web server for the prediction of antibody epitopes
Nature Protocols·2023· 36 citedOpen Access
High Accuracy Prediction of PROTAC Complex Structures
Journal of the American Chemical Society·2023· 50 citedOpen Access
Mapping of antibody epitopes based on docking and homology modeling
Proteins Structure Function and Bioinformatics·2022· 24 citedOpen Access
Benchmark Sets for Binding Hot Spot Identification in Fragment-Based Ligand Discovery
Journal of Chemical Information and Modeling·2020· 11 citedOpen Access
Issue Information ‐ Forthcoming
Proteins Structure Function and Bioinformatics·2020· 1 citedOpen Access
Issue Information ‐ Forthcoming
Proteins Structure Function and Bioinformatics·2020Open Access
ClusPro in rounds 38 to 45 of CAPRI: Toward combining template‐based methods with free docking
Proteins Structure Function and Bioinformatics·2020· 12 citedOpen Access
Author response for "ClusPro in rounds 38‐45 of CAPRI: Toward combining template‐based methods with free docking"
2020Open Access
Author response for "ClusPro in rounds 38‐45 of CAPRI: Toward combining template‐based methods with free docking"
2019
Structure-Based Analysis of Cryptic-Site Opening
Structure·2019· 25 citedOpen Access
Blind prediction of homo‐ and hetero‐protein complexes: The CASP13‐CAPRI experiment
Proteins Structure Function and Bioinformatics·2019· 138 citedOpen Access
Amidino-Rocaglates: A Potent Class of eIF4A Inhibitors
Cell chemical biology·2019· 74 citedOpen Access
Template‐based modeling by ClusPro in CASP13 and the potential for using co‐evolutionary information in docking
Proteins Structure Function and Bioinformatics·2019· 18 citedOpen Access
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Frequent Co-authors

Dima Kozakov(43), Sándor Vajda(43), David R. Hall(12), Ryan Brenke(10), Tanggis Bohnuud(9), Adrian Whitty(8), Dzmitry Padhorny(7), Scott E. Mottarella(7), Yang Shen(7), Sergei Kotelnikov(7), David Hall(6), Gwo‐Yu Chuang(5), Ora Schueler‐Furman(5), Paul A. Bates(5), Brian G. Pierce(5), Daisuke Kihara(5), Juan Fernández‐Recio(5), Israel Desta(5), Kathryn A. Porter(4), Christine Yueh(4)