Josue Samayoa

Jackson Laboratory — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

14h-index1.9kcitations86works0.22yr avg
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Research Topics

Cancer Genomics and Diagnostics(20), Single-cell and spatial transcriptomics(20), Monoclonal and Polyclonal Antibodies Research(18), Cancer Immunotherapy and Biomarkers(17), Cancer-related molecular mechanisms research(14)

Publications86 total

Clinical and Cross-Domain Validation of an LLM-Guided, Literature-Based Gene Prioritization Framework
2026Open Access
Pairwise ratio transformation of gene expression data leads to improved checkpoint response prediction in lung cancer patients
BMC Bioinformatics·2025Open Access
Supplementary Methods File S1 from iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-cell RNA-Seq Data and Differentiate Cell Type–Specific Markers of Immune-Cell Infiltration
2025Open Access
Supplementary Figures from iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-cell RNA-Seq Data and Differentiate Cell Type–Specific Markers of Immune-Cell Infiltration
2025Open Access
Supplementary Tables from iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-cell RNA-Seq Data and Differentiate Cell Type–Specific Markers of Immune-Cell Infiltration
2025Open Access
Multimodal integration strategies for clinical application in oncology
Frontiers in Pharmacology·2025· 3 citedOpen Access
Interplatform and cross-cohort meta-analysis of tumor transcriptomics to predict non-small cell lung cancer c-Met protein overexpression.
Journal of Clinical Oncology·2025
Abstract 2386: Preclinical model atlas to enable clinical translatability for precision oncology
Cancer Research·2025
Abstract 3395: Investigating clinical features and molecular mechanisms of long-term response and acquired resistance to immunotherapy in non-small cell lung cancer by applying real-world-data
Cancer Research·2025
Abstract 6638: Identifying cancer germline variants associated with patient prognosis and response by applying clinico-genomics data
Cancer Research·2025
Abstract A099: The IO-Atlas Project: A cross-cohort tumor immunophenotyping platform enhancing precision immuno-oncology
Cancer Immunology Research·2025· 1 cited
Supplementary Figures from iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-Cell RNAseq Data and Differentiate Cell Type–Specific Markers of Immune-Cell Infiltration
2024Open Access
Supplementary Methods File S1 from iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-Cell RNAseq Data and Differentiate Cell Type–Specific Markers of Immune-Cell Infiltration
2024Open Access
Supplementary Methods File S1 from iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-Cell RNAseq Data and Differentiate Cell Type–Specific Markers of Immune-Cell Infiltration
2024Open Access
Supplementary Tables from iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-Cell RNAseq Data and Differentiate Cell Type–Specific Markers of Immune-Cell Infiltration
2024Open Access
Supplementary Tables from iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-Cell RNAseq Data and Differentiate Cell Type–Specific Markers of Immune-Cell Infiltration
2024Open Access
Supplementary Figures from iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-Cell RNAseq Data and Differentiate Cell Type–Specific Markers of Immune-Cell Infiltration
2024Open Access
tauX: A Gene Expression Ratio Strategy to Improve Machine Learning Applications in Precision Medicine
2024Open Access
Abstract 2551: Harness the power of real-world-data for oncology target and biomarker research: A case study by applying clinic-genomics data for 2,659 lung cancer patients and beyond
Cancer Research·2024
Abstract 2310: Integrating real-world histopathological and clinicogenomic data from 1799 lung cancer patients by applying unsupervised deep learning
Cancer Research·2024
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Frequent Co-authors

Tolga Turan(22), Kyle Halliwill(18), Melvin Fox(16), Diane Hollenbaugh(16), Sarah Kongpachith(16), Mien Sho(14), Debra T. Chao(14), Howard J. Jacob(14), Xi Zhao(14), Rebecca Mathew(13), Robert T. McLaughlin(12), Mikhail Binnewies(12), Dhemath Reddy(12), Shiming Ye(12), Hamsell M. Alvarez(11), Yoshiko Akamatsu(11), Zhenghai Xu(10), Belinda Cairns(10), C.M. Forsyth(10), Francesco M. Marincola(9)