Carol L. Thompson

Allen Institute — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

42h-index15.4kcitations166works106.02yr avg
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Research Topics

Single-cell and spatial transcriptomics(17), Circadian rhythm and melatonin(15), Photoreceptor and optogenetics research(14), Vietnamese History and Culture Studies(14), Light effects on plants(12)

Publications162 total

Integrating multimodal data to understand cortical circuit architecture and function
Nature Neuroscience·2025· 11 cited
Integrated multimodal cell atlas of Alzheimer’s disease
Nature Neuroscience·2024· 201 citedOpen Access
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
Nature·2023· 892 citedOpen Access
A guide to the BRAIN Initiative Cell Census Network data ecosystem
PLoS Biology·2023· 48 citedOpen Access
Integrated multimodal cell atlas of Alzheimer’s disease
2023· 63 citedOpen Access
Integrated multimodal cell atlas of Alzheimer’s disease
2023· 40 citedOpen Access
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
2023· 135 citedOpen Access
The BRAIN Initiative Cell Census Network Data Ecosystem: A User’s Guide
2022· 7 citedOpen Access
Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia
Proceedings of the National Academy of Sciences·2022· 31 citedOpen Access
Transcriptional network orchestrating regional patterning of cortical progenitors
Proceedings of the National Academy of Sciences·2021· 52 citedOpen Access
Light Induction of a Vertebrate Clock Gene Involves Signaling through Blue-Light Receptors and MAP Kinases
UNC Libraries·2021Open Access
Survey of spiking in the mouse visual system reveals functional hierarchy
Nature·2021· 626 citedOpen Access
Single Cell Enhancer Activity Maps Neuronal Lineages in Embryonic Mouse Basal Ganglia
2021· 2 citedOpen Access
Transcriptional Network Orchestrating Regional Patterning of Cortical Progenitors
2020· 4 citedOpen Access
A large-scale standardized physiological survey reveals functional organization of the mouse visual cortex
Nature Neuroscience·2019· 312 citedOpen Access
A survey of spiking activity reveals a functional hierarchy of mouse corticothalamic visual areas
2019· 69 citedOpen Access
Wildtype epidermal growth factor receptor (Egfr) is not required for daily locomotor or masking behavior in mice
UNC Libraries·2019Open Access
Biological variation in the sizes, shapes and locations of visual cortical areas in the mouse
PLoS ONE·2019· 25 citedOpen Access
Biological variation in the sizes, shapes and locations of visual cortical areas in the mouse
2018· 2 citedOpen Access
A large-scale, standardized physiological survey reveals higher order coding throughout the mouse visual cortex
2018· 151 citedOpen Access
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Frequent Co-authors

Lydia Ng(17), Michael Hawrylycz(13), Tim Dolbeare(10), Susan M. Sunkin(10), Ed S. Lein(9), Aziz Sancar(9), Hongkui Zeng(9), Amy Bernard(8), Boaz P. Levi(8), Jack Waters(8), Nick Dee(7), Nadiya V. Shapovalova(7), Kimberly A. Smith(7), Tyler Mollenkopf(7), Cliff Slaughterbeck(7), Kathleen Puntillo(7), Julie Stanik-Hutt(7), Arielle Leon(6), Colin Farrell(6), Shoaib Mufti(6)