Sara Knaack

University of Wisconsin–Madison — United States

Agricultural and Biological Sciences · Life Sciences

9h-index565citations41works8.22yr avg
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Research Topics

Legume Nitrogen Fixing Symbiosis(8), Genomics and Chromatin Dynamics(7), Single-cell and spatial transcriptomics(7), Parallel Computing and Optimization Techniques(6), Plant nutrient uptake and metabolism(6)

Publications41 total

Molecular and cellular processes disrupted in the early postnatal Down syndrome prefrontal cortex
2025· 5 citedOpen Access
Single‐nucleus analysis reveals oxidative stress in Down syndrome basal forebrain neurons at birth
Alzheimer s & Dementia·2025· 4 citedOpen Access
Multimodal analyses reveal genes driving electrophysiological maturation of neurons in the primate prefrontal cortex
Neuron·2025· 8 cited
Single-nucleus analysis reveals oxidative stress in Down syndrome basal forebrain neurons at birth
2025· 1 citedOpen Access
The single-cell transcriptome program of nodule development cellular lineages in Medicago truncatula
Cell Reports·2024· 31 citedOpen Access
Complementary files - The Single-Cell Transcriptome Program of Nodule Development Cellular Lineages in <i>Medicago truncatula</i>
Figshare·2024Open Access
The Single-Cell Transcriptome Program of Nodule Development Cellular Lineages in <i>Medicago truncatula</i>
2023· 2 citedOpen Access
Multimodal analyses reveal genes driving electrophysiological maturation of neurons in the primate prefrontal cortex
2023· 4 citedOpen Access
Temporal change in chromatin accessibility predicts regulators of nodulation in Medicago truncatula
BMC Biology·2022· 11 citedOpen Access
Single-nuclei transcriptome analysis of the shoot apex vascular system differentiation in <i>Populus</i>
Development·2022· 58 citedOpen Access
An LCO-responsive homolog of <i>NODULE INCEPTION</i> positively regulates lateral root formation in <i>Populus</i> sp.
PLANT PHYSIOLOGY·2022· 9 citedOpen Access
Dynamic regulatory module networks for inference of cell type–specific transcriptional networks
Genome Research·2022· 6 citedOpen Access
Dynamic regulatory module networks for inference of cell type-specific transcriptional networks - Sridharan et al. array data set input files for DRMN analysis
Zenodo (CERN European Organization for Nuclear Research)·2022Open Access
Functional and comparative genomics reveals conserved noncoding sequences in the nitrogen‐fixing clade
New Phytologist·2022· 7 citedOpen Access
Enabling Studies of Genome-Scale Regulatory Network Evolution in Large Phylogenies with MRTLE
Methods in molecular biology·2022· 3 citedOpen Access
Additional file 2 of Temporal change in chromatin accessibility predicts regulators of nodulation in Medicago truncatula
Figshare·2022Open Access
Complementary files - Single-cell analysis of the shoot apex vascular system differentiation in Populus
Figshare·2022Open Access
Single-cell analysis resolves the genetic program of primary vascular system formation in hybrid poplar
2021· 1 citedOpen Access
Temporal change in chromatin accessibility predicts regulators of nodulation in <i>Medicago truncatula</i>
2021· 2 citedOpen Access
Functional and comparative genomics reveals conserved noncoding sequences in the nitrogen-fixing clade
2021· 1 citedOpen Access
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Frequent Co-authors

Sushmita Roy(31), Daniel Conde(13), Paolo M. Triozzi(13), Henry W. Schmidt(13), Matias Kirst(13), Deborah Chasman(12), Wendell J. Pereira(12), Kelly M. Balmant(12), Christopher Dervinis(12), Sanhita Chakraborty(10), Jean‐Michel Ané(10), Shilu Zhang(9), Alireza Fotuhi Siahpirani(6), Kalpana Hanthanan Arachchilage(5), Ryan D. Risgaard(5), Daifeng Wang(5), André M. M. Sousa(5), Ron Stewart(4), Rupa Sridharan(4), T. B. Irving(4)