Xiaoyin Chen

Jiangnan University — China

Biochemistry, Genetics and Molecular Biology · Life Sciences

15h-index1.9kcitations78works3.52yr avg
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Research Topics

Single-cell and spatial transcriptomics(30), Cell Image Analysis Techniques(27), Advanced Fluorescence Microscopy Techniques(10), Marine Biology and Ecology Research(5), Neural dynamics and brain function(4)

Publications78 total

The new frontier in understanding human and mammalian brain development
Nature·2025· 2 cited
Cross-expression meta-analysis of mouse brain slices reveals coordinated gene expression across spatially adjacent cells
Genome biology·2025Open Access
The xIV-LDDMM toolkit of image-varifold based technologies for mapping 3D images and spatial-omics across scales
Communications Biology·2025Open Access
PipelineRL: Faster On-policy Reinforcement Learning for Long Sequence Generation
arXiv (Cornell University)·2025Open Access
Lipidomics revealed the geographical origin and breed variability of sheep milk
Food Bioscience·2025
Self-Evolving Curriculum for LLM Reasoning
arXiv (Cornell University)·2025Open Access
Textual form features for text readability assessment
Natural language processing.·2024· 2 citedOpen Access
xIV-LDDMM Toolkit: A Suite of Image-Varifold Based Technologies for Representing and Mapping 3D Imaging and Spatial-omics Data Simultaneously Across Scales
2024Open Access
Structure Language Models for Protein Conformation Generation
arXiv (Cornell University)·2024· 3 citedOpen Access
Proof Flow: Preliminary Study on Generative Flow Network Language Model Tuning for Formal Reasoning
arXiv (Cornell University)·2024· 1 citedOpen Access
Inference and Verbalization Functions During In-Context Learning
arXiv (Cornell University)·2024Open Access
Key environmental parameters and numerical prediction model of jellyfish bloom in Qingchuan Bay Nuclear Power Plant, China
Marine Environmental Research·2024· 2 cited
HarmAug: Effective Data Augmentation for Knowledge Distillation of Safety Guard Models
arXiv (Cornell University)·2024Open Access
Massive multiplexing of spatially resolved single neuron projections with axonal BARseq
Nature Communications·2024· 15 citedOpen Access
Cross-expression meta-analysis of 695 brain samples reveals coordinated gene expression across spatially adjacent cells
2024Open Access
Cross-modality mapping using image varifolds to align tissue-scale atlases to molecular-scale measures with application to 2D brain sections
Nature Communications·2024· 5 citedOpen Access
Whole-cortex in situ sequencing reveals input-dependent area identity
Nature·2024· 43 citedOpen Access
Reimagining Cortical Connectivity by Deconstructing Its Molecular Logic into Building Blocks
Cold Spring Harbor Perspectives in Biology·2024
Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing
eLife·2024· 4 citedOpen Access
Author Response: Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing
2024Open Access
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Frequent Co-authors

Anthony M. Zador(17), Jesse Gillis(9), Stephan Fischer(8), Yu-Chi Sun(8), Shenqin Yao(7), Aixin Zhang(7), Huiqing Zhan(6), Cindy T. J. van Velthoven(6), Bosiljka Tasic(6), Katherine S. Matho(5), Lei Jin(5), Makoto Matsuyama(5), Heather A. Sullivan(5), Na Sun(5), Manolis Kellis(5), Ian R. Wickersham(5), Martin Chalfie(4), Yongsoo Kim(4), Hongkui Zeng(4), Z. Josh Huang(4)