Catherine Lozupone

Colorado School of Public Health — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

74h-index150.5kcitations194works2.42yr avg
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Research Topics

Gut microbiota and health(131), Genomics and Phylogenetic Studies(35), Clostridium difficile and Clostridium perfringens research(30), Microbial Community Ecology and Physiology(28), Reproductive tract infections research(22)

Publications190 total

cogent3/cogent3: REL: 2026.1.6a1
Zenodo (CERN European Organization for Nuclear Research)·2026Open Access
Gut microbiome composition influences immunologic alterations in the blood and gut of HIV-positive and HIV-negative men who have sex with men
Frontiers in Immunology·2026Open Access
EXPLANA: a user-friendly workflow for EXPLoratory ANAlysis and feature selection in cross-sectional and longitudinal microbiome studies
Bioinformatics·2025Open Access
Agrarian diet improves metabolic health in HIV-positive men with <i>Prevotella</i> -rich microbiomes: results from a randomized trial
mSystems·2025· 2 citedOpen Access
A capsular polysaccharide from a healthy human microbiota member activates a Lag-3-NK cell axis to restrain colon cancer and augment immunotherapy
Cell Reports·2025· 3 citedOpen Access
The impact of western versus agrarian diet consumption on gut microbiome composition and immune dysfunction in people living with HIV in rural and urban Zimbabwe
2025· 1 citedOpen Access
Gut microbiome changes in pediatric AML and association with event free survival.
Journal of Clinical Oncology·2025· 1 cited
The Impact of Diet on <i>Clostridioides difficile</i> Infection: A Review
The Journal of Infectious Diseases·2025· 4 citedOpen Access
KG-Microbe - Building Modular and Scalable Knowledge Graphs for Microbiome and Microbial Sciences
2025· 3 citedOpen Access
Ecological relationships between human gut bacteria predicted from analysis of dense microbiome time series data from US travelers in Bangladesh
2025Open Access
Hypothesizing mechanistic links between microbes and disease using knowledge graphs
Scientific Reports·2025· 3 citedOpen Access
Appearance of green tea compounds in plasma following acute green tea consumption is modulated by the gut microbiome in mice
Microbiology Spectrum·2025· 2 citedOpen Access
Increasing resolution of diet-microbe relationships at the compound-enzyme level using networks.
Faculty of 1000 Research Ltd·2025Open Access
Agrarian Diet Improves Metabolic Health in HIV-positive Men with Prevotella-Rich Microbiomes: Results from a Randomized Trial
2024· 2 citedOpen Access
Appearance of green tea compounds in plasma following acute green tea consumption is modulated by the gut microbiome in mice
2024Open Access
Deciphering HIV-associated inflammation: microbiome's influence and experimental insights
Current Opinion in HIV and AIDS·2024· 2 citedOpen Access
Integrating biological knowledge for mechanistic inference in the host-associated microbiome
Frontiers in Microbiology·2024· 5 citedOpen Access
EXPLANA: A user-friendly workflow for EXPLoratory ANAlysis and feature selection in cross-sectional and longitudinal microbiome studies
2024· 1 citedOpen Access
Differential effects of antiretroviral treatment on immunity and gut microbiome composition in people living with HIV in rural versus urban Zimbabwe
Microbiome·2024· 16 citedOpen Access
Hypothesizing mechanistic links between microbes and disease using knowledge graphs
2023· 3 citedOpen Access
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Frequent Co-authors

Rob Knight(36), Jeffrey I. Gordon(13), Dan Knights(12), Ruth E. Ley(11), Micah Hamady(10), Scott T. Kelley(9), Daniel McDonald(9), Peter J. Turnbaugh(9), Noah Fierer(8), Yoshiki Vázquez‐Baeza(8), J. Gregory Caporaso(7), Kyle Bittinger(7), Gavin Huttley(7), Michael S. Robeson(7), Michael Shaffer(7), Se Jin Song(7), Jesse Stombaugh(6), Frederic D. Bushman(6), Evan Bolyen(6), Eric J. Alm(6)