Daniel L. Ayres

Washington Department of Fish and Wildlife — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

9h-index31.9kcitations11works0.02yr avg
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Research Topics

Genomics and Phylogenetic Studies(9), Genetic diversity and population structure(5), Evolution and Paleontology Studies(4), Algorithms and Data Compression(3), Marine Biology and Ecology Research(2)

Publications11 total

Assessing a model of Pacific Northwest harmful algal bloom transport as a decision-support tool
Harmful Algae·2022· 19 citedOpen Access
BEAGLE 3: Improved Performance, Scaling, and Usability for a High-Performance Computing Library for Statistical Phylogenetics
Systematic Biology·2019· 277 citedOpen Access
High-Performance Computing in Bayesian Phylogenetics and Phylodynamics Using BEAGLE
Methods in molecular biology·2019· 17 citedOpen Access
Comparative morphology and evolution of the cnidosac in Cladobranchia (Gastropoda: Heterobranchia: Nudibranchia)
Frontiers in Zoology·2018· 64 citedOpen Access
Rerooting Trees Increases Opportunities for Concurrent Computation and Results in Markedly Improved Performance for Phylogenetic Inference
2018· 2 cited
Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10
Virus Evolution·2018· 3.9k citedOpen Access
Heterogeneous Hardware Support in BEAGLE, a High-Performance Computing Library for Statistical Phylogenetics
2017· 9 cited
Research And Application Of Parallel Computing Algorithms For Statistical Phylogenetic Inference
Digital Repository at the University of Maryland (University of Maryland College Park)·2017· 1 citedOpen Access
Configuring Concurrent Computation of Phylogenetic Partial Likelihoods: Accelerating Analyses Using the BEAGLE Library
Lecture notes in computer science·2017· 9 cited
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
Systematic Biology·2012· 26.9k citedOpen Access
BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics
Systematic Biology·2011· 752 citedOpen Access

Frequent Co-authors

Michael P. Cummings(6), Marc A. Suchard(5), Andrew Rambaut(4), Aaron E. Darling(3), John P. Huelsenbeck(3), Philippe Lemey(3), Guy Baele(3), Fredrik Ronquist(2), Paul O. Lewis(2), David L. Swofford(2), Maxim Teslenko(1), Paul van der Mark(1), Sebastian Höhna(1), Bret Larget(1), Liang Liu(1), Alexei J. Drummond(1), Derrick J. Zwickl(1), Peter Beerli(1), Mark T. Holder(1), Jessica A. Goodheart(1)