Asaf Rotem

Medicine · Health Sciences

28h-index12.6kcitations139works4.62yr avg
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Research Topics

Cancer Immunotherapy and Biomarkers(42), Single-cell and spatial transcriptomics(42), Cancer Genomics and Diagnostics(38), Cancer Cells and Metastasis(15), Genetic factors in colorectal cancer(10)

Publications137 total

Single-nucleus RNA-seq of archived PAXgene whole blood samples
Mendeley Data·2026Open Access
A cellular and spatial atlas of TP53-associated tissue remodeling defines a multicellular tumor ecosystem in lung adenocarcinoma
Nature Cancer·2025· 2 citedOpen Access
Cell lysis plus depletion single-nucleus RNA-seq (CL-D snRNAseq) v1
2025Open Access
supplementary materials 1 from Cambridge Neoadjuvant Cancer of the Prostate (CANCAP03): A Window Study into the Effects of Olaparib ± Degarelix in Primary Prostate Cancer
2025Open Access
Figure S2 from Cambridge Neoadjuvant Cancer of the Prostate (CANCAP03): A Window Study into the Effects of Olaparib ± Degarelix in Primary Prostate Cancer
2025Open Access
Data from Cambridge Neoadjuvant Cancer of the Prostate (CANCAP03): A Window Study into the Effects of Olaparib ± Degarelix in Primary Prostate Cancer
2025Open Access
Figure S3 from Cambridge Neoadjuvant Cancer of the Prostate (CANCAP03): A Window Study into the Effects of Olaparib ± Degarelix in Primary Prostate Cancer
2025Open Access
Figure S1 from Cambridge Neoadjuvant Cancer of the Prostate (CANCAP03): A Window Study into the Effects of Olaparib ± Degarelix in Primary Prostate Cancer
2025Open Access
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma
Cancer Cell·2025· 3 citedOpen Access
Cambridge Neoadjuvant Cancer of the Prostate (CANCAP03): A Window Study into the Effects of Olaparib ± Degarelix in Primary Prostate Cancer
Clinical Cancer Research·2025Open Access
Author Correction: A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features
Nature Medicine·2025Open Access
Comprehensive cellular analysis with single-nucleus RNA-seq of archived PAXgene whole blood samples
2025Open Access
A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features
Nature Medicine·2024· 50 citedOpen Access
561P Liquid biopsy tracking of immunotherapy-induced T cell dynamics in MSS colorectal and endometrial tumors
Annals of Oncology·2024Open Access
Single cell characterization of persistent cells upon immunotherapy treatment in colorectal and endometrial tumors: The SERPENTINE trial.
Journal of Clinical Oncology·2024
Abstract 3520: A scalable single cell RNA-seq pipeline leveraging machine learning and high-quality references for cell-type prediction
Cancer Research·2024
Abstract 4342: Breast cancer multi-omic single cell profiling identifies key progressive disease markers
Cancer Research·2024
A spatial cell atlas of neuroblastoma reveals developmental, epigenetic and spatial axis of tumor heterogeneity
2024· 28 citedOpen Access
Intertumoral lineage diversity and immunosuppressive transcriptional programs in well-differentiated gastroenteropancreatic neuroendocrine tumors
Science Advances·2023· 31 citedOpen Access
A cellular and spatial atlas of <i>TP53</i> -associated tissue remodeling in lung adenocarcinoma
2023· 5 citedOpen Access
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Frequent Co-authors

Orit Rozenblatt–Rosen(23), Aviv Regev(21), Benjamin Izar(19), Bruce E. Johnson(18), Isaac Wakiro(18), Sébastien Vigneau(18), Judit Jané‐Valbuena(12), Jingyi Wu(12), Mei-Ju Su(12), Ofir Cohen(11), Levi A. Garraway(11), Laura DelloStritto(11), Eliezer M. Van Allen(10), Michael S. Cuoco(10), Abhay Kanodia(10), Parin Shah(9), Michal Slyper(9), Julia Waldman(9), Charles H. Yoon(8), Alex K. Shalek(8)