Joseph L. DeRisi

University of California, San Francisco — United States

Medicine · Health Sciences

102h-index61.5kcitations575works5.52yr avg
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Research Topics

SARS-CoV-2 and COVID-19 Research(57), Respiratory viral infections research(53), Malaria Research and Control(51), Genomics and Phylogenetic Studies(38), RNA and protein synthesis mechanisms(35)

Publications568 total

P-1776. Combatting the brain-eating ameba Balamuthia mandrillaris: from bench to bedside to public health
Open Forum Infectious Diseases·2026Open Access
Host–Microbiome Archetypes Differentiate Infection from Pathogen Carriage in the Human Lower Airway
2025Open Access
Integrated Host-Microbe Signatures Differentiate Respiratory Infection from Incidental Pathogen Carriage
2025
Genomic and Serologic Characterization of Enterovirus A71 Brainstem Encephalitis
Neurology Neuroimmunology & Neuroinflammation·2025Open Access
P02.02.A IL6 UNDERLIES MICROENVIRONMENT IMMUNOSUPPRESSION AND RESISTANCE TO THERAPY IN GLIOBLASTOMA
Neuro-Oncology·2025Open Access
Acute Respiratory Distress Syndrome Molecular Phenotypes Have Distinct Lower Respiratory Tract Transcriptomes
American Journal of Respiratory and Critical Care Medicine·2025· 5 citedOpen Access
Etiological spectrum of non-compressive myelopathies in Uganda: a prospective, observational study using neuroimaging, autoantibodies, and next-generation sequencing
2025Open Access
Active Antigen-Specific Adaptive Immune Responses Are Shared among Patients with Progressive Fibrotic Interstitial Lung Disease
American Journal of Respiratory and Critical Care Medicine·2025· 1 cited
Defining the host dependencies and the transcriptional landscape of RSV infection
mBio·2025· 2 citedOpen Access
Host–Microbe Multiomic Profiling Predicts Mortality in Sepsis
American Journal of Respiratory and Critical Care Medicine·2025· 1 citedOpen Access
Integrating pulmonary and systemic transcriptomes to characterize lung injury after pediatric hematopoietic stem cell transplant
JCI Insight·2025· 1 citedOpen Access
Remoscope: a label-free imaging cytometer for malaria diagnostics
Transactions of the Royal Society of Tropical Medicine and Hygiene·2025
Prospective Genomic Surveillance of Severe Febrile Illness in Tanzanian Children Identifies High Mortality and Resistance to First-Line Antibiotics in Bloodstream Infections
2025Open Access
Infection in Childhood Arterial Ischemic Stroke: Metagenomic Next-Generation Sequencing Results of the VIPS II Study
Stroke·2025
FRI-303 Immune profiling in autoimmune hepatitis identifies distinct patterns autoreactivity
Journal of Hepatology·2025
Phage Therapy Was Associated With Increased Antibiotic Resistance in a Patient With Cystic Fibrosis
American Journal of Respiratory and Critical Care Medicine·2025
Comparative Transcriptome Analysis of BAL and Blood in Pediatric HCT Recipients
American Journal of Respiratory and Critical Care Medicine·2025
NFKB2 haploinsufficiency identified via screening for IFN-α2 autoantibodies in children and adolescents hospitalized with SARS-CoV-2–related complications
UNC Libraries·2025Open Access
Epitope Mapping and Autoantigen Profiling in Hu-Associated Paraneoplastic Neurological Syndromes Using PhIP-Seq (S18.004)
Neurology·2025
Integrating Pulmonary and Systemic Transcriptomic Profiles to Characterize Lung Injury after Pediatric Hematopoietic Stem Cell Transplant
2025Open Access
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Frequent Co-authors

Patrick O. Brown(10), Michael R. Wilson(10), Charles Y. Chiu(8), Charles Langelier(7), Don Ganem(7), Steve Miller(6), Eric D. Chow(5), David Wang(4), Scot Federman(4), Hannah A. Sample(4), Kelsey C. Zorn(4), Emily Crawford(4), J. Graham Ruby(4), Brian D. O’Donovan(4), Dean D. Erdman(3), Zbynek Bozdech(3), Samia N. Naccache(3), Guixia Yu(3), Katherine S. Pollard(3), Amy Kistler(3)