Christopher R. Keefe

Northern Arizona University — United States

Decision Sciences · Social Sciences

7h-index24.7kcitations12works0.02yr avg
OpenAlex↗ORCID↗Google Scholar↗Lab page↗

Accepting Students?

No reports yet. Know if this professor is taking students?

Research Topics

Scientific Computing and Data Management(6), Gut microbiota and health(5), Metabolomics and Mass Spectrometry Studies(4), Clostridium difficile and Clostridium perfringens research(4), Cell Image Analysis Techniques(4)

Publications12 total

Facilitating bioinformatics reproducibility with QIIME 2 Provenance Replay
PLoS Computational Biology·2023· 12 citedOpen Access
Facilitating Bioinformatics Reproducibility
arXiv (Cornell University)·2023Open Access
Predicting Neurodegenerative Disease Using Prepathology Gut Microbiota Composition: a Longitudinal Study in Mice Modeling Alzheimer’s Disease Pathologies
Microbiology Spectrum·2023· 42 citedOpen Access
Predicting neurodegenerative disease using the unique gut microbiota composition of transgenic mice modeling amyloid‐β plaques and neurofibrillary tangles
Alzheimer s & Dementia·2022· 1 cited
Influence of fecal microbiota transplantation on gut microbiota composition in transgenic mice modeling amyloid‐β plaques and neurofibrillary tangles
Alzheimer s & Dementia·2022Open Access
Predicting neurodegenerative disease using pre-pathology gut microbiota composition: a longitudinal study in mice modeling Alzheimer’s disease pathologies
Research Square (Research Square)·2022· 3 citedOpen Access
Experiences and lessons learned from two virtual, hands-on microbiome bioinformatics workshops
PLoS Computational Biology·2021· 6 citedOpen Access
Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Nature Biotechnology·2019· 833 citedOpen Access
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Nature Biotechnology·2019· 22.2k citedOpen Access
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
2018· 578 citedOpen Access
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
2018· 189 citedOpen Access
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
2018· 875 citedOpen Access

Frequent Co-authors

Evan Bolyen(12), Matthew R. Dillon(10), Emily K. Cope(10), J. Gregory Caporaso(7), Nicholas A. Bokulich(6), Mehrbod Estaki(6), Benjamin D. Kaehler(6), Jessica L. Metcalf(6), Jamie Morton(6), Michael S. Robeson(6), Yoshiki Vázquez‐Baeza(6), Jai Ram Rideout(5), Christian C. Abnet(5), Gabriel A. Al‐Ghalith(5), Harriet Alexander(5), Eric J. Alm(5), Manimozhiyan Arumugam(5), Francesco Asnicar(5), Jordan E. Bisanz(5), Kyle Bittinger(5)