Tomasz Kościółek

Biochemistry, Genetics and Molecular Biology · Life Sciences

31h-index35.9kcitations109works7.52yr avg
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Research Topics

Gut microbiota and health(45), Diet and metabolism studies(14), Protein Structure and Dynamics(13), Dermatology and Skin Diseases(13), Genomics and Phylogenetic Studies(11)

Publications102 total

The impact of maternal microbial transfer on the infant gut microbiome after cesarean delivery: a systematic review
American Journal of Obstetrics and Gynecology·2026Open Access
Genetic architecture and mechanisms of host-microbiome interactions from a multi-cohort analysis of outbred laboratory rats
Nature Communications·2025Open Access
High-altitude mountaineering induces adaptive gut microbiome shifts associated with dietary intake and performance markers
Scientific Reports·2025Open Access
Gut microbiome and cognitive function in the Hispanic Community Health Study/Study of Latinos
Journal of Alzheimer s Disease·2025· 1 cited
Large protein databases reveal structural complementarity and functional locality
Nature Communications·2025Open Access
A large-scale comparative metagenomic analysis of short-read sequencing platforms indicates high taxonomic concordance and functional analysis challenges
2025Open Access
High-altitude mountaineering induces adaptive gut microbiome shifts associated with dietary intake and performance markers
2025Open Access
Gut microbiome and blood biomarkers reveal differential responses to aerobic and anaerobic exercise in collegiate men of diverse training backgrounds
Scientific Reports·2025· 7 citedOpen Access
Novel insights into the genetic architecture and mechanisms of host/microbiome interactions from a multi-cohort analysis of outbred laboratory rats
2025Open Access
SARS-CoV-2 infectivity can be modulated through bacterial grooming of the glycocalyx
mBio·2025· 1 citedOpen Access
Analysis of metagenomic data
Nature Reviews Methods Primers·2025· 33 citedOpen Access
Effects of data transformation and model selection on feature importance in microbiome classification data
Microbiome·2025· 20 citedOpen Access
Explainable Artificial Intelligence for Bioactivity Prediction: Unveiling the Challenges with Curated CDK2/4/6 Breast Cancer Dataset
Lecture notes in computer science·2025Open Access
Aggregating gut: on the link between neurodegeneration and bacterial functional amyloids
2024· 1 citedOpen Access
Integrative Metagenomic and Blood Biomarker Analysis Reveals Distinct Metabolic Responses to Aerobic and Anaerobic Interventions in Athletic and Non-Athletic Individuals
2024· 1 citedOpen Access
Adaptation to space conditions of novel bacterial species isolated from the International Space Station revealed by functional gene annotations and comparative genome analysis
Microbiome·2024· 19 citedOpen Access
Targeted isolation of Methanobrevibacter strains from fecal samples expands the cultivated human archaeome
Nature Communications·2024· 12 citedOpen Access
Microbiome time series data reveal predictable patterns of change
Microbiology Spectrum·2024· 8 citedOpen Access
Large protein databases reveal structural complementarity and functional locality
2024· 3 citedOpen Access
Retraction Note: Microbiome analyses of blood and tissues suggest cancer diagnostic approach
Nature·2024· 17 citedOpen Access
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Frequent Co-authors

Rob Knight(27), Stefan Janssen(17), Austin D. Swafford(15), Daniel McDonald(13), Se Jin Song(12), Pieter C. Dorrestein(11), Jessica L. Metcalf(11), Yoshiki Vázquez‐Baeza(11), Qiyun Zhu(11), Lingjing Jiang(10), Alexey V. Melnik(9), José A. Navas-Molina(9), Luke Thompson(9), Anupriya Tripathi(9), Evan Bolyen(8), Curtis Huttenhower(8), Dan Knights(8), Clarisse Marotz(8), Matthew R. Dillon(7), Nicholas A. Bokulich(7)