Jeremy A. Miller

University of Washington — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

49h-index20.5kcitations179works18.32yr avg
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Research Topics

Single-cell and spatial transcriptomics(77), Neuroinflammation and Neurodegeneration Mechanisms(52), Cell Image Analysis Techniques(28), Bioinformatics and Genomic Networks(21), Neural dynamics and brain function(18)

Publications178 total

The Caudate Nucleus Exhibits Distinct Pathology and Cell Type-Specific Responses Across Alzheimer’s Disease
2026Open Access
Cross-species consensus atlas of the primate basal ganglia
2025· 5 citedOpen Access
An integrated, multiregional, and multimodal cell atlas of Alzheimer’s disease
Alzheimer s & Dementia·2025Open Access
Nanolipoprotein particle (NLP) vaccine confers protection against Yersinia pestis aerosol challenge in a BALB/c mouse model
Frontiers in Immunology·2025Open Access
Genetic modulation of immune gene co-expression in the aged mouse hippocampus by the <i>Apbb1ip</i> locus
2025Open Access
Evaluating methods for the prediction of cell-type-specific enhancers in the mammalian cortex
Cell Genomics·2025· 12 citedOpen Access
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage
Nature Methods·2025· 18 citedOpen Access
Structure-based discovery of hydrocarbon-stapled paxillin peptides that block FAK scaffolding in cancer
Nature Communications·2025· 8 citedOpen Access
Annotation Comparison Explorer (ACE): connecting brain cell types across studies of health and Alzheimer’s Disease
2025· 1 citedOpen Access
SEA-AD is a multimodal cellular atlas and resource for Alzheimer’s disease
Nature Aging·2024· 23 citedOpen Access
Areal specializations in the morpho-electric and transcriptomic properties of primate layer 5 extratelencephalic projection neurons
Cell Reports·2024· 9 citedOpen Access
Evaluating Methods for the Prediction of Cell Type-Specific Enhancers in the Mammalian Cortex
2024· 3 citedOpen Access
Sex differences in immune protection in mice conferred by heterologous vaccines for pneumonic plague
Frontiers in Immunology·2024· 12 citedOpen Access
Sex differences in protection conferred by heterologous vaccines for pneumonic plague in an aerosol challenge model
The Journal of Immunology·2024
Evaluating Methods for the Prediction of Cell Type-Specific Enhancers in the Mammalian Cortex
SSRN Electronic Journal·2024· 1 citedOpen Access
Molecular hallmarks of Alzheimer’s disease with a multimodal single cell atlas of the cortex
Alzheimer s & Dementia·2023Open Access
Multimodal and multiregional atlas of Alzheimer’s disease changes
Alzheimer s & Dementia·2023· 2 citedOpen Access
Signature morphoelectric properties of diverse GABAergic interneurons in the human neocortex
Science·2023· 114 citedOpen Access
Morphoelectric and transcriptomic divergence of the layer 1 interneuron repertoire in human versus mouse neocortex
Science·2023· 78 citedOpen Access
Interindividual variation in human cortical cell type abundance and expression
Science·2023· 53 citedOpen Access
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Frequent Co-authors

Ed S. Lein(35), Trygve E. Bakken(23), Kimberly A. Smith(22), Nick Dee(18), Jeff Goldy(18), Rebecca D. Hodge(18), Michael Hawrylycz(16), Amy Bernard(16), Darren Bertagnolli(15), Susan M. Sunkin(15), Rachel Dalley(14), Hongkui Zeng(13), Tamara Casper(12), C. Dirk Keene(12), Allan R. Jones(11), Bosiljka Tasic(11), Zizhen Yao(11), John W. Phillips(11), Brian D. Aevermann(11), Song‐Lin Ding(11)