Darren Bertagnolli

Allen Institute for Brain Science — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

34h-index19.3kcitations65works9.62yr avg
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Research Topics

Single-cell and spatial transcriptomics(41), Neuroinflammation and Neurodegeneration Mechanisms(30), Neural dynamics and brain function(14), Cell Image Analysis Techniques(10), Neurogenesis and neuroplasticity mechanisms(8)

Publications65 total

Cross-species consensus atlas of the primate basal ganglia
2025· 5 citedOpen Access
Multimodal Atlas of Caudate Head Reveals Impact of pTau Burden on Resident Glial Cells
Alzheimer s & Dementia·2025Open Access
An integrated, multiregional, and multimodal cell atlas of Alzheimer’s disease
Alzheimer s & Dementia·2025Open Access
Continuous cell-type diversification in mouse visual cortex development
Nature·2025· 8 citedOpen Access
Enhancer-AAVs allow genetic access to oligodendrocytes and diverse populations of astrocytes across species
2025· 1 citedOpen Access
Enhancer-AAVs allow genetic access to oligodendrocytes and diverse populations of astrocytes across species
2025Open Access
HCN channels reveal conserved and divergent physiology in supragranular pyramidal neurons in primate species
2025· 1 citedOpen Access
Enhancer AAV toolbox for accessing and perturbing striatal cell types and circuits
Neuron·2025· 30 citedOpen Access
A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types
Cell·2025· 33 citedOpen Access
Technical and biological sources of noise confound multiplexed enhancer AAV screening
2025· 4 citedOpen Access
Continuous cell type diversification throughout the embryonic and postnatal mouse visual cortex development
2024· 9 citedOpen Access
Enhancer AAV toolbox for accessing and perturbing striatal cell types and circuits
2024· 13 citedOpen Access
Areal specializations in the morpho-electric and transcriptomic properties of primate layer 5 extratelencephalic projection neurons
Cell Reports·2024· 9 citedOpen Access
A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types
2024· 21 citedOpen Access
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
Nature·2023· 892 citedOpen Access
Connecting single-cell transcriptomes to projectomes in mouse visual cortex
2023· 13 citedOpen Access
Signature morphoelectric properties of diverse GABAergic interneurons in the human neocortex
Science·2023· 114 citedOpen Access
Comparative transcriptomics reveals human-specific cortical features
Science·2023· 171 citedOpen Access
Transcriptomic cytoarchitecture reveals principles of human neocortex organization
Science·2023· 173 citedOpen Access
Morphoelectric and transcriptomic divergence of the layer 1 interneuron repertoire in human versus mouse neocortex
Science·2023· 78 citedOpen Access
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Frequent Co-authors

Jeff Goldy(48), Kimberly A. Smith(41), Nick Dee(39), Tamara Casper(37), Ed S. Lein(31), Michael Tieu(30), Hongkui Zeng(28), Bosiljka Tasic(27), Christine Rimorin(27), Susan M. Sunkin(26), Michael Hawrylycz(25), Zizhen Yao(24), Trygve E. Bakken(24), Delissa McMillen(24), Jeremy A. Miller(23), Boaz P. Levi(22), Nadiya V. Shapovalova(21), Lucas T. Graybuck(20), Matthew Kroll(20), Krissy Brouner(20)